| № | City | Airport | IATA code | ICAO code |
| 1 | Damazin | Damazin | RSS | HSDZ |
| 2 | Dongola | Dongola | DOG | HSDN |
| 3 | Addeain | El Daein | ADV | |
| 4 | El Fasher | El Fasher | ELF | HSFS |
| 5 | El Obeid | El Obeid | EBD | HSOB |
| 6 | Geneina | Geneina | EGN | HSGN |
| 7 | Kadugli | Kadugli | KDX | HSLI |
| 8 | Kassala | Kassala | KSL | HSKA |
| 9 | Khartoum | Khartoum International | KRT | HSSS |
| 10 | Merowe | Merowe | MWE | HSMR |
| 11 | Nyala | Nyala | UYL | HSNN |
| 12 | Port Sudan | Port Sudan | PZU | HSPN |
| 13 | Wadi Halfa | Wadi Halfa | WHF | HSSW |
| 14 | Zalengei | Zalingei | ZLX | HSZA |