| № | City | Airport | IATA code | ICAO code |
| 1 | Karasburg | Karasburg | KAS | FYKB |
| 2 | Luderitz | Luderitz | LUD | FYLZ |
| 3 | Mpacha | Mpacha Katima Mulilo | MPA | FYKM |
| 4 | Ondangwa | Ondangwa | OND | FYOA |
| 5 | Oranjemund | Oranjemund | OMD | FYOG |
| 6 | Rundu | Rundu | NDU | FYRU |
| 7 | Walvis Bay | Walvis Bay Rooikop | WVB | FYWB |
| 8 | Windhoek | Windhoek Eros | ERS | FYWE |
| 9 | Windhoek | Windhoek Hosea Kutako International | WDH | FYWH |